Neuroimaging

CANlab Github: Our main fMRI analysis tools (MATLAB)
SPM: free and open source software for Statistical Parametric Mapping
Neurosynth: large-scale, automated synthesis of fMRI data.
Neurovault: public repository of statistical maps, parcellations, and atlases of the brain.

 

Neural Networks

EmoNet: a convolutional neural net developed by our group that predicts emotional responses to images
ONNX Model Zoo: collection of pre-trained, state-of-the-art models in the ONNX format
TensorFlow: an end-to-end open source platform for machine learning written in Python
OpenAI Gym: a toolkit for developing and comparing reinforcement learning algorithms

 

Math and Statistics

The Elements of Statistical Learning: text by Hastie, Tibshirani, and Friedman
Understanding Machine Learning: From Theory to Algorithms: text by Shalev-Shwartz and Ben-David
Statistical Learning (YouTube) by Hastie and Tibshirani
Linear Algebra (YouTube) by Gilbert Strang
Matrix Methods (YouTube) by Gilbert Strang

 

Data Sharing Platforms

OpenNeuro: A free and open platform for sharing MRI, MEG, EEG, iEEG, and ECoG data
DataLad: Data portal and versioning system
INDI: International Data-sharing Initiative
NITRC: Neuroimaging Informatics Tools and Resources Clearinghouse
LONI IDA: Laboratory of Neuro Imaging Image & Data Archive
COINS: Collaborative Informatics and Neuroimaging Suite
NA-MIC: National Alliance for Medical Image Computing